Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 AC068587.7-201ENST00000641602 218 ntBASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CYSTM1Q9H1C7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 Z92544.1-202ENST00000571933 1220 ntBASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 AC087239.1-201ENST00000622671 572 ntBASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 HNRNPLP2-201ENST00000568980 1570 ntBASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC10.3□□□□□ -0.76
CYSTM1Q9H1C7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
CYSTM1Q9H1C7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms