Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 AC012618.2-201ENST00000428058 849 ntBASIC18.6■□□□□ 0.57
DDX47Q9H0S4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 AC233702.5-201ENST00000584107 538 ntBASIC18.6■□□□□ 0.57
DDX47Q9H0S4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 ITM2C-210ENST00000620962 501 ntBASIC18.6■□□□□ 0.57
DDX47Q9H0S4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
DDX47Q9H0S4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 KRT18P29-201ENST00000397031 1267 ntBASIC18.59■□□□□ 0.57
DDX47Q9H0S4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 BX088651.1-201ENST00000540551 451 ntBASIC18.59■□□□□ 0.57
DDX47Q9H0S4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DDX47Q9H0S4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DDX47Q9H0S4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 AC007663.1-201ENST00000438948 1240 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 FAM201B-201ENST00000458407 597 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 SEC1P-202ENST00000473944 940 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 AC142381.4-202ENST00000563973 229 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 AP001412.1-201ENST00000608405 714 ntBASIC18.58■□□□□ 0.56
DDX47Q9H0S4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.58■□□□□ 0.56
DDX47Q9H0S4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AC106886.4-201ENST00000623557 2502 ntBASIC18.57■□□□□ 0.56
DDX47Q9H0S4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 PRORSD1P-201ENST00000295112 541 ntBASIC18.57■□□□□ 0.56
DDX47Q9H0S4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DDX47Q9H0S4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms