Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC093010.1-201ENST00000473625 1624 ntBASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AL390961.4-201ENST00000623958 2535 ntBASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 PKD1P1-201ENST00000458669 6805 ntBASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC112698.1-201ENST00000510299 916 ntBASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 RN7SL510P-201ENST00000581311 263 ntBASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SSBP3Q9BWW4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 AC132938.6-201ENST00000623828 1655 ntBASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 AC022898.2-201ENST00000616822 1312 ntBASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SSBP3Q9BWW4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 FAAHP1-202ENST00000446499 1238 ntBASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 AC009533.2-201ENST00000543664 586 ntBASIC14.87□□□□□ -0.03
SSBP3Q9BWW4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms