Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 NUS1P1-201ENST00000446295 882 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 RN7SL606P-201ENST00000472779 293 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 KRT126P-201ENST00000549467 1181 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 AC012615.1-201ENST00000565797 1299 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 Z69720.1-201ENST00000601483 472 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 AL592071.1-201ENST00000611956 408 ntBASIC12.45□□□□□ -0.42
UPK3BQ9BT76 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK3BQ9BT76 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 AC018470.1-201ENST00000624790 3129 ntBASIC12.44□□□□□ -0.42
UPK3BQ9BT76 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PRELID1P1-202ENST00000567272 903 ntBASIC12.44□□□□□ -0.42
UPK3BQ9BT76 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 AC004263.2-201ENST00000617183 678 ntBASIC12.44□□□□□ -0.42
UPK3BQ9BT76 AL391005.1-201ENST00000623953 2435 ntBASIC12.44□□□□□ -0.42
UPK3BQ9BT76 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK3BQ9BT76 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 AL499627.1-201ENST00000569373 2188 ntBASIC12.43□□□□□ -0.42
UPK3BQ9BT76 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 AL450487.1-201ENST00000426799 995 ntBASIC12.43□□□□□ -0.42
UPK3BQ9BT76 DUSP5P1-201ENST00000441325 1139 ntBASIC12.43□□□□□ -0.42
UPK3BQ9BT76 LINC00265-3P-201ENST00000447588 903 ntBASIC12.43□□□□□ -0.42
UPK3BQ9BT76 TOB2P1-201ENST00000469761 992 ntBASIC12.43□□□□□ -0.42
UPK3BQ9BT76 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 AL691432.3-201ENST00000621860 400 ntBASIC12.43□□□□□ -0.42
UPK3BQ9BT76 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK3BQ9BT76 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms