Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 AP002414.4-201ENST00000589764 1148 ntBASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 IGHV3-41-201ENST00000613121 348 ntBASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.99□□□□□ -0.01
PCGF1Q9BSM1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 CLEC4GP1-201ENST00000596555 870 ntBASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 NPAP1P7-201ENST00000613027 823 ntBASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 AC009053.2-201ENST00000563701 2365 ntBASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCGF1Q9BSM1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 IGHGP-201ENST00000390555 1178 ntBASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 MIR3652-201ENST00000579335 131 ntBASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 AL390719.2-201ENST00000606993 987 ntBASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCGF1Q9BSM1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCGF1Q9BSM1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms