Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 AL033527.4-201ENST00000641026 673 ntBASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSMD1Q96PZ7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 FAM86GP-201ENST00000448322 971 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC005332.7-201ENST00000614046 2005 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC084346.2-201ENST00000607097 949 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 MTMR9LP-203ENST00000426597 1545 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 KRT18P41-201ENST00000518924 1277 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC010654.1-201ENST00000615722 808 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC098818.2-201ENST00000564925 2320 ntBASIC15.09■□□□□ 0.01
CSMD1Q96PZ7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 BCAR1-209ENST00000546196 1340 ntBASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.08■□□□□ 0.01
CSMD1Q96PZ7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.08■□□□□ 0
CSMD1Q96PZ7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 AL022326.1-202ENST00000641533 845 ntBASIC15.08■□□□□ 0
CSMD1Q96PZ7 AL121761.2-201ENST00000598007 1648 ntBASIC15.08■□□□□ 0
CSMD1Q96PZ7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.08■□□□□ 0
CSMD1Q96PZ7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 HILS1-202ENST00000545329 423 ntBASIC15.07■□□□□ 0
CSMD1Q96PZ7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CSMD1Q96PZ7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CSMD1Q96PZ7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms