Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 FAM58DP-201ENST00000428076 619 ntBASIC18.21■□□□□ 0.51
NECAB3Q96P71 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECAB3Q96P71 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.21■□□□□ 0.51
NECAB3Q96P71 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
NECAB3Q96P71 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 PTCHD3P3-201ENST00000403073 906 ntBASIC18.2■□□□□ 0.5
NECAB3Q96P71 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 AC069335.1-201ENST00000489972 472 ntBASIC18.2■□□□□ 0.5
NECAB3Q96P71 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.2■□□□□ 0.5
NECAB3Q96P71 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECAB3Q96P71 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NECAB3Q96P71 GPR53P-205ENST00000457298 1084 ntBASIC18.19■□□□□ 0.5
NECAB3Q96P71 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECAB3Q96P71 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 AC010336.2-201ENST00000564226 506 ntBASIC18.19■□□□□ 0.5
NECAB3Q96P71 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 AC026120.1-201ENST00000611536 926 ntBASIC18.19■□□□□ 0.5
NECAB3Q96P71 AC116407.2-201ENST00000613639 860 ntBASIC18.19■□□□□ 0.5
NECAB3Q96P71 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECAB3Q96P71 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECAB3Q96P71 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECAB3Q96P71 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.19■□□□□ 0.5
NECAB3Q96P71 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECAB3Q96P71 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECAB3Q96P71 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.18■□□□□ 0.5
NECAB3Q96P71 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms