Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.89■□□□□ 0.29
COL21A1Q96P44 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 AL024508.2-201ENST00000607749 1894 ntBASIC16.88■□□□□ 0.29
COL21A1Q96P44 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 NTF6B-201ENST00000591913 560 ntBASIC16.88■□□□□ 0.29
COL21A1Q96P44 AL136038.4-201ENST00000603606 1261 ntBASIC16.88■□□□□ 0.29
COL21A1Q96P44 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.88■□□□□ 0.29
COL21A1Q96P44 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL21A1Q96P44 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL21A1Q96P44 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 AL391807.1-203ENST00000604392 2365 ntBASIC16.87■□□□□ 0.29
COL21A1Q96P44 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 MIR1224-201ENST00000408193 85 ntBASIC16.87■□□□□ 0.29
COL21A1Q96P44 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 AL671277.2-201ENST00000458060 996 ntBASIC16.87■□□□□ 0.29
COL21A1Q96P44 AC092597.1-201ENST00000487352 616 ntBASIC16.87■□□□□ 0.29
COL21A1Q96P44 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 AC079602.3-201ENST00000623931 403 ntBASIC16.87■□□□□ 0.29
COL21A1Q96P44 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 LINC01311-201ENST00000565162 1445 ntBASIC16.87■□□□□ 0.29
COL21A1Q96P44 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL21A1Q96P44 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL21A1Q96P44 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL21A1Q96P44 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms