Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 AL589182.2-201ENST00000619332 1049 ntBASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
CNTNAP3BQ96NU0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3BQ96NU0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3BQ96NU0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CNTNAP3BQ96NU0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3BQ96NU0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNTNAP3BQ96NU0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 BX005266.1-201ENST00000473402 457 ntBASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AL138831.2-201ENST00000606564 490 ntBASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CNTNAP3BQ96NU0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AC003669.1-201ENST00000334569 611 ntBASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 BID-203ENST00000399765 1879 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 RN7SL692P-201ENST00000464677 288 ntBASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AL132655.2-201ENST00000596276 594 ntBASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 AC116407.2-201ENST00000613639 860 ntBASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17■□□□□ 0.31
CNTNAP3BQ96NU0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 KRT17P7-201ENST00000451704 1104 ntBASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 GPR53P-205ENST00000457298 1084 ntBASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CNTNAP3BQ96NU0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms