Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AL121912.1-201ENST00000603683 238 ntBASIC14.98□□□□□ -0.01
TIMD4Q96H15 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 AL138781.2-201ENST00000617896 1843 ntBASIC14.98□□□□□ -0.01
TIMD4Q96H15 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TIMD4Q96H15 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.98□□□□□ -0.01
TIMD4Q96H15 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 FAM220CP-201ENST00000395253 831 ntBASIC14.97□□□□□ -0.01
TIMD4Q96H15 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 AC011467.2-201ENST00000598425 242 ntBASIC14.97□□□□□ -0.01
TIMD4Q96H15 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.97□□□□□ -0.01
TIMD4Q96H15 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TIMD4Q96H15 AL096828.2-201ENST00000567259 1965 ntBASIC14.96□□□□□ -0.01
TIMD4Q96H15 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 AC097374.2-201ENST00000618617 1306 ntBASIC14.96□□□□□ -0.01
TIMD4Q96H15 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 RBM17P3-201ENST00000417687 1192 ntBASIC14.96□□□□□ -0.01
TIMD4Q96H15 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 KRT8P10-201ENST00000450021 1447 ntBASIC14.96□□□□□ -0.01
TIMD4Q96H15 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 AL662844.1-201ENST00000546340 181 ntBASIC14.96□□□□□ -0.01
TIMD4Q96H15 AL160237.2-201ENST00000556165 472 ntBASIC14.96□□□□□ -0.01
TIMD4Q96H15 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.96□□□□□ -0.01
TIMD4Q96H15 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TIMD4Q96H15 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms