Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 AL353801.3-201ENST00000609898 542 ntBASIC16.11■□□□□ 0.17
LRRC46Q96FV0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.11■□□□□ 0.17
LRRC46Q96FV0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 AL121912.1-201ENST00000603683 238 ntBASIC16.1■□□□□ 0.17
LRRC46Q96FV0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC46Q96FV0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 HEIH-201ENST00000623091 1652 ntBASIC16.09■□□□□ 0.17
LRRC46Q96FV0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 KRT18P41-201ENST00000518924 1277 ntBASIC16.09■□□□□ 0.17
LRRC46Q96FV0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.09■□□□□ 0.17
LRRC46Q96FV0 AL031008.1-201ENST00000619963 541 ntBASIC16.09■□□□□ 0.17
LRRC46Q96FV0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 AC124067.4-201ENST00000519691 2379 ntBASIC16.09■□□□□ 0.17
LRRC46Q96FV0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRC46Q96FV0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRC46Q96FV0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms