Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 FITM1-202ENST00000559294 800 ntBASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC47A1Q96FL8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AP003041.3-201ENST00000527151 707 ntBASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 MIR4674-201ENST00000582457 87 ntBASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AP000525.1-201ENST00000608286 694 ntBASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC47A1Q96FL8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 KRT18P23-201ENST00000435622 1283 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 SNORA78-201ENST00000459373 127 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 BX088651.1-201ENST00000540551 451 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 C2orf69P3-201ENST00000565542 1120 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC116562.4-202ENST00000641738 218 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 HOXB1-202ENST00000577092 1414 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AL024508.2-201ENST00000607749 1894 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 AC100803.2-201ENST00000562459 1963 ntBASIC16.84■□□□□ 0.29
SLC47A1Q96FL8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC47A1Q96FL8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC47A1Q96FL8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SLC47A1Q96FL8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC47A1Q96FL8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms