Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 AP001094.4-201ENST00000579008 2176 ntBASIC17.66■□□□□ 0.42
SPDL1Q96EA4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 RNA5SP413-201ENST00000516373 109 ntBASIC17.66■□□□□ 0.42
SPDL1Q96EA4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 AC124016.1-201ENST00000609552 612 ntBASIC17.66■□□□□ 0.42
SPDL1Q96EA4 AL109659.2-201ENST00000606809 1674 ntBASIC17.66■□□□□ 0.42
SPDL1Q96EA4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.66■□□□□ 0.42
SPDL1Q96EA4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.65■□□□□ 0.42
SPDL1Q96EA4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 AP002982.1-201ENST00000492365 877 ntBASIC17.65■□□□□ 0.42
SPDL1Q96EA4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 CKBP1-201ENST00000565489 1086 ntBASIC17.65■□□□□ 0.42
SPDL1Q96EA4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.65■□□□□ 0.42
SPDL1Q96EA4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.65■□□□□ 0.42
SPDL1Q96EA4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPDL1Q96EA4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPDL1Q96EA4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SPDL1Q96EA4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPDL1Q96EA4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.64■□□□□ 0.42
SPDL1Q96EA4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.64■□□□□ 0.41
SPDL1Q96EA4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 AL355802.2-201ENST00000402069 882 ntBASIC17.64■□□□□ 0.41
SPDL1Q96EA4 KSR1P1-201ENST00000446298 240 ntBASIC17.64■□□□□ 0.41
SPDL1Q96EA4 AC133681.1-201ENST00000465482 601 ntBASIC17.64■□□□□ 0.41
SPDL1Q96EA4 RPS2P4-201ENST00000476944 856 ntBASIC17.64■□□□□ 0.41
SPDL1Q96EA4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPDL1Q96EA4 AL353708.3-201ENST00000610272 989 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms