Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC091607.1-201ENST00000490318 1060 ntBASIC15.82■□□□□ 0.12
APH1AQ96BI3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 AP005901.3-202ENST00000581653 237 ntBASIC15.82■□□□□ 0.12
APH1AQ96BI3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 AC099336.1-202ENST00000602961 463 ntBASIC15.82■□□□□ 0.12
APH1AQ96BI3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
APH1AQ96BI3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
APH1AQ96BI3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
APH1AQ96BI3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.81■□□□□ 0.12
APH1AQ96BI3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.8■□□□□ 0.12
APH1AQ96BI3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 AC005336.2-201ENST00000593183 939 ntBASIC15.8■□□□□ 0.12
APH1AQ96BI3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 AC138894.3-201ENST00000603787 634 ntBASIC15.8■□□□□ 0.12
APH1AQ96BI3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
APH1AQ96BI3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
APH1AQ96BI3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms