Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 AP000523.1-201ENST00000398242 1049 ntBASIC18.8■□□□□ 0.6
RNF25Q96BH1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
RNF25Q96BH1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF25Q96BH1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 LINC00602-201ENST00000629776 2065 ntBASIC18.79■□□□□ 0.6
RNF25Q96BH1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.79■□□□□ 0.6
RNF25Q96BH1 DUTP2-201ENST00000519164 463 ntBASIC18.79■□□□□ 0.6
RNF25Q96BH1 AC010203.1-204ENST00000548782 407 ntBASIC18.79■□□□□ 0.6
RNF25Q96BH1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF25Q96BH1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF25Q96BH1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 LINC00167-201ENST00000530583 1419 ntBASIC18.78■□□□□ 0.6
RNF25Q96BH1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.78■□□□□ 0.6
RNF25Q96BH1 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 AL391001.1-201ENST00000602747 715 ntBASIC18.78■□□□□ 0.6
RNF25Q96BH1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.78■□□□□ 0.6
RNF25Q96BH1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RNF25Q96BH1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF25Q96BH1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 AC092473.1-201ENST00000441098 221 ntBASIC18.77■□□□□ 0.6
RNF25Q96BH1 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF25Q96BH1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF25Q96BH1 AC140113.3-201ENST00000605663 199 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms