Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD2Q92925 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD2Q92925 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SMARCD2Q92925 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD2Q92925 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SMARCD2Q92925 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 NCF1C-201ENST00000438382 1427 ntBASIC18.25■□□□□ 0.51
SMARCD2Q92925 AC003669.1-201ENST00000334569 611 ntBASIC18.25■□□□□ 0.51
SMARCD2Q92925 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 KLF4P1-201ENST00000412782 1185 ntBASIC18.25■□□□□ 0.51
SMARCD2Q92925 ELK2BP-201ENST00000415014 1224 ntBASIC18.25■□□□□ 0.51
SMARCD2Q92925 PMS2P2-201ENST00000425039 1128 ntBASIC18.25■□□□□ 0.51
SMARCD2Q92925 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.25■□□□□ 0.51
SMARCD2Q92925 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD2Q92925 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMARCD2Q92925 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD2Q92925 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD2Q92925 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 AC006504.4-201ENST00000592118 1568 ntBASIC18.25■□□□□ 0.51
SMARCD2Q92925 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SMARCD2Q92925 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD2Q92925 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 AC138932.1-201ENST00000534164 6830 ntBASIC18.24■□□□□ 0.51
SMARCD2Q92925 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.24■□□□□ 0.51
SMARCD2Q92925 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 AC148477.5-201ENST00000625164 1645 ntBASIC18.24■□□□□ 0.51
SMARCD2Q92925 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 CRYGEP-201ENST00000412192 528 ntBASIC18.24■□□□□ 0.51
SMARCD2Q92925 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 SIGLEC30P-201ENST00000455569 941 ntBASIC18.24■□□□□ 0.51
SMARCD2Q92925 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
SMARCD2Q92925 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD2Q92925 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 AL096828.2-201ENST00000567259 1965 ntBASIC18.23■□□□□ 0.51
SMARCD2Q92925 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 MCCD1P2-201ENST00000423228 335 ntBASIC18.23■□□□□ 0.51
SMARCD2Q92925 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SMARCD2Q92925 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD2Q92925 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SMARCD2Q92925 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD2Q92925 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD2Q92925 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCD2Q92925 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCD2Q92925 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD2Q92925 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD2Q92925 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD2Q92925 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
SMARCD2Q92925 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD2Q92925 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCD2Q92925 AC002310.6-201ENST00000624451 1377 ntBASIC18.22■□□□□ 0.51
SMARCD2Q92925 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms