Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.09■□□□□ 0.17
RNF138Q8WVD3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF138Q8WVD3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 AC132938.5-201ENST00000624980 1813 ntBASIC16.08■□□□□ 0.17
RNF138Q8WVD3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 AC007613.1-201ENST00000572811 2597 ntBASIC16.08■□□□□ 0.17
RNF138Q8WVD3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
RNF138Q8WVD3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 MYCLP1-201ENST00000372451 1075 ntBASIC16.08■□□□□ 0.16
RNF138Q8WVD3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 SAPCD2P3-201ENST00000455031 850 ntBASIC16.08■□□□□ 0.16
RNF138Q8WVD3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 AC109462.3-201ENST00000573934 613 ntBASIC16.08■□□□□ 0.16
RNF138Q8WVD3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 AL355877.3-201ENST00000622820 899 ntBASIC16.08■□□□□ 0.16
RNF138Q8WVD3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF138Q8WVD3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 AC134043.2-201ENST00000624206 2238 ntBASIC16.07■□□□□ 0.16
RNF138Q8WVD3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF138Q8WVD3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AL355312.1-201ENST00000407115 2176 ntBASIC16.06■□□□□ 0.16
RNF138Q8WVD3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.06■□□□□ 0.16
RNF138Q8WVD3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 FGFR3P6-201ENST00000457012 610 ntBASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AF238378.1-201ENST00000526806 358 ntBASIC16.06■□□□□ 0.16
RNF138Q8WVD3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 AL691432.3-201ENST00000621860 400 ntBASIC16.06■□□□□ 0.16
RNF138Q8WVD3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF138Q8WVD3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms