Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
BBS1Q8NFJ9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 INGX-201ENST00000359239 846 ntBASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 AC024243.1-201ENST00000609234 778 ntBASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 AC116562.4-202ENST00000641738 218 ntBASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
BBS1Q8NFJ9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 AC009949.1-201ENST00000623048 1830 ntBASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 TSPY7P-201ENST00000431358 1114 ntBASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 FITM1-202ENST00000559294 800 ntBASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.06■□□□□ 0.16
BBS1Q8NFJ9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 HLA-J-201ENST00000462773 1622 ntBASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BBS1Q8NFJ9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms