Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AC010653.2-201ENST00000623505 997 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPSF7Q8N684 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CPSF7Q8N684 HOXB1-202ENST00000577092 1414 ntBASIC17.47■□□□□ 0.39
CPSF7Q8N684 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 CROCCP2-202ENST00000412962 2773 ntBASIC17.46■□□□□ 0.39
CPSF7Q8N684 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 AK4P3-201ENST00000418260 669 ntBASIC17.46■□□□□ 0.39
CPSF7Q8N684 BX664615.1-201ENST00000443558 458 ntBASIC17.46■□□□□ 0.39
CPSF7Q8N684 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 WWOX-216ENST00000569818 525 ntBASIC17.46■□□□□ 0.39
CPSF7Q8N684 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 AC011270.2-201ENST00000624293 2550 ntBASIC17.46■□□□□ 0.39
CPSF7Q8N684 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CPSF7Q8N684 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPSF7Q8N684 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 AL353719.1-201ENST00000566847 864 ntBASIC17.45■□□□□ 0.38
CPSF7Q8N684 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CPSF7Q8N684 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CPSF7Q8N684 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPSF7Q8N684 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 AC117947.1-201ENST00000427448 529 ntBASIC17.44■□□□□ 0.38
CPSF7Q8N684 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPSF7Q8N684 AL138966.2-201ENST00000621997 464 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms