Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 AL590787.1-201ENST00000568856 1315 ntBASIC24.55■■□□□ 1.52
XRN1Q8IZH2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 AL031598.1-201ENST00000561511 1773 ntBASIC24.55■■□□□ 1.52
XRN1Q8IZH2 AC100803.2-201ENST00000562459 1963 ntBASIC24.55■■□□□ 1.52
XRN1Q8IZH2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 CYP51A1P2-201ENST00000419457 1499 ntBASIC24.55■■□□□ 1.52
XRN1Q8IZH2 LINC00982-205ENST00000420957 435 ntBASIC24.55■■□□□ 1.52
XRN1Q8IZH2 DDX43P3-201ENST00000441064 443 ntBASIC24.55■■□□□ 1.52
XRN1Q8IZH2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC24.55■■□□□ 1.52
XRN1Q8IZH2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
XRN1Q8IZH2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 LINC00628-201ENST00000628516 1289 ntBASIC24.53■■□□□ 1.52
XRN1Q8IZH2 AL121761.2-201ENST00000598007 1648 ntBASIC24.53■■□□□ 1.52
XRN1Q8IZH2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
XRN1Q8IZH2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AL355306.1-201ENST00000415580 579 ntBASIC24.52■■□□□ 1.52
XRN1Q8IZH2 FAM86GP-201ENST00000448322 971 ntBASIC24.52■■□□□ 1.52
XRN1Q8IZH2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AC138761.1-201ENST00000584393 385 ntBASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 TK1-204ENST00000590430 683 ntTSL 3 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 COPE-202ENST00000349893 948 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 AC097637.2-201ENST00000624096 1997 ntBASIC24.52■■□□□ 1.52
XRN1Q8IZH2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
XRN1Q8IZH2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 BX276092.7-203ENST00000637198 1536 ntBASIC24.51■■□□□ 1.51
XRN1Q8IZH2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
XRN1Q8IZH2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms