Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 AC007967.2-201ENST00000432613 625 ntBASIC18.9■□□□□ 0.62
RNF135Q8IUD6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF135Q8IUD6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF135Q8IUD6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF135Q8IUD6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF135Q8IUD6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 AC023274.1-201ENST00000418278 595 ntBASIC18.89■□□□□ 0.61
RNF135Q8IUD6 FAM8A3P-201ENST00000427218 844 ntBASIC18.89■□□□□ 0.61
RNF135Q8IUD6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 AC005336.2-201ENST00000593183 939 ntBASIC18.89■□□□□ 0.61
RNF135Q8IUD6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 AP005117.1-201ENST00000584346 1413 ntBASIC18.89■□□□□ 0.61
RNF135Q8IUD6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF135Q8IUD6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 AC005082.1-201ENST00000413042 2259 ntBASIC18.88■□□□□ 0.61
RNF135Q8IUD6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 UNC93B6-202ENST00000528242 690 ntBASIC18.88■□□□□ 0.61
RNF135Q8IUD6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 AC112777.1-201ENST00000540175 1423 ntBASIC18.88■□□□□ 0.61
RNF135Q8IUD6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF135Q8IUD6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms