Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 REXO1L10P-201ENST00000615707 1290 ntBASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 REXO1L12P-201ENST00000622156 912 ntBASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 AP005242.2-201ENST00000580065 1175 ntBASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 FAM197Y4-202ENST00000622692 608 ntBASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM1Q86UE6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 SLC25A1P2-201ENST00000430693 912 ntBASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 TSPY17P-201ENST00000450329 467 ntBASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LRRTM1Q86UE6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms