Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 AC112907.2-201ENST00000448639 330 ntBASIC20.13■□□□□ 0.81
SHC4Q6S5L8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHC4Q6S5L8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AC022211.2-201ENST00000585075 2527 ntBASIC20.12■□□□□ 0.81
SHC4Q6S5L8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AC009053.2-201ENST00000563701 2365 ntBASIC20.12■□□□□ 0.81
SHC4Q6S5L8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AC104076.2-201ENST00000448912 469 ntBASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AC068472.1-201ENST00000474589 881 ntBASIC20.12■□□□□ 0.81
SHC4Q6S5L8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 ZNF444P1-201ENST00000559497 298 ntBASIC20.12■□□□□ 0.81
SHC4Q6S5L8 RNF126P1-202ENST00000569893 925 ntBASIC20.12■□□□□ 0.81
SHC4Q6S5L8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHC4Q6S5L8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 AK4P3-201ENST00000418260 669 ntBASIC20.11■□□□□ 0.81
SHC4Q6S5L8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 HOMER2P1-201ENST00000455653 964 ntBASIC20.11■□□□□ 0.81
SHC4Q6S5L8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 GPR32P1-201ENST00000601788 811 ntBASIC20.11■□□□□ 0.81
SHC4Q6S5L8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 PRORSD1P-202ENST00000563365 2154 ntBASIC20.11■□□□□ 0.81
SHC4Q6S5L8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHC4Q6S5L8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 MTCL1P1-201ENST00000446207 792 ntBASIC20.1■□□□□ 0.81
SHC4Q6S5L8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHC4Q6S5L8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms