Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 AC097493.4-201ENST00000641197 219 ntBASIC15.61■□□□□ 0.09
C11orf88Q6PI97 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
C11orf88Q6PI97 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 AC087499.1-201ENST00000418141 1075 ntBASIC15.6■□□□□ 0.09
C11orf88Q6PI97 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 KSR1P1-201ENST00000446298 240 ntBASIC15.6■□□□□ 0.09
C11orf88Q6PI97 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 AC018695.7-201ENST00000624587 2492 ntBASIC15.6■□□□□ 0.09
C11orf88Q6PI97 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 NKILA-202ENST00000614771 2598 ntBASIC15.6■□□□□ 0.09
C11orf88Q6PI97 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
C11orf88Q6PI97 AC011676.5-201ENST00000624864 2660 ntBASIC15.6■□□□□ 0.09
C11orf88Q6PI97 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 MMP23A-201ENST00000234610 1017 ntBASIC15.59■□□□□ 0.09
C11orf88Q6PI97 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 KRT18P16-201ENST00000510337 1294 ntBASIC15.59■□□□□ 0.09
C11orf88Q6PI97 NUDT16P1-203ENST00000513809 620 ntBASIC15.59■□□□□ 0.09
C11orf88Q6PI97 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AL355075.4-201ENST00000554988 638 ntBASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AC133561.5-201ENST00000635547 218 ntBASIC15.59■□□□□ 0.09
C11orf88Q6PI97 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
C11orf88Q6PI97 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.58■□□□□ 0.09
C11orf88Q6PI97 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
C11orf88Q6PI97 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf88Q6PI97 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
C11orf88Q6PI97 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
C11orf88Q6PI97 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms