Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AL023284.2-201ENST00000405850 579 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AC087499.1-201ENST00000418141 1075 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AP003041.3-201ENST00000527151 707 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AC008622.2-201ENST00000617006 1229 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AC010947.1-201ENST00000623454 693 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AC068587.9-201ENST00000641814 219 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 CYP2D8P-201ENST00000433633 1490 ntBASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.4■□□□□ 0.22
TMEM53Q6P2H8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
TMEM53Q6P2H8 LINC01568-207ENST00000641790 1380 ntBASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 AC092338.2-201ENST00000568827 1415 ntBASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 AC007663.1-201ENST00000438948 1240 ntBASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 KRT18P22-201ENST00000402024 1347 ntBASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM53Q6P2H8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 PKD1P1-201ENST00000458669 6805 ntBASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM53Q6P2H8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms