Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LINC01126-201ENST00000623515 1646 ntBASIC16.85■□□□□ 0.29
LPCAT4Q643R3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LPCAT4Q643R3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 MIR564-202ENST00000385049 94 ntBASIC16.84■□□□□ 0.29
LPCAT4Q643R3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LPCAT4Q643R3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LPCAT4Q643R3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
LPCAT4Q643R3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LPCAT4Q643R3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LPCAT4Q643R3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LPCAT4Q643R3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LPCAT4Q643R3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 AF201337.1-201ENST00000520239 748 ntBASIC16.83■□□□□ 0.28
LPCAT4Q643R3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LPCAT4Q643R3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 AC009102.3-201ENST00000623118 1491 ntBASIC16.82■□□□□ 0.28
LPCAT4Q643R3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LPCAT4Q643R3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms