Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 KRT18P56-201ENST00000507275 550 ntBASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 REXO1L9P-201ENST00000604264 2108 ntBASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TTC39BQ5VTQ0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 LINC00265-3P-201ENST00000447588 903 ntBASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 Z69720.1-201ENST00000601483 472 ntBASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.59■□□□□ 0.57
TTC39BQ5VTQ0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 PHGDH-209ENST00000641074 1780 ntBASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TTC39BQ5VTQ0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 TOB2P1-201ENST00000469761 992 ntBASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 AC012615.1-201ENST00000565797 1299 ntBASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 AC011840.4-201ENST00000578471 627 ntBASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 AL353801.3-201ENST00000609898 542 ntBASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TTC39BQ5VTQ0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
TTC39BQ5VTQ0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms