Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 KRT8P23-201ENST00000560090 1207 ntBASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 AC099568.2-201ENST00000609194 695 ntBASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.21■□□□□ 0.67
PRPF38BQ5VTL8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.2■□□□□ 0.66
PRPF38BQ5VTL8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AP006294.1-201ENST00000415407 339 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 ACTBP11-201ENST00000436287 1126 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 RN7SL752P-201ENST00000463779 287 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC112698.1-201ENST00000510299 916 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC103810.3-201ENST00000583567 96 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC099522.2-201ENST00000607001 744 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 AC022144.1-201ENST00000602255 1580 ntBASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRPF38BQ5VTL8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 SPDYE14P-201ENST00000442619 822 ntBASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AC122714.2-201ENST00000502787 707 ntBASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AC132938.2-201ENST00000579188 680 ntBASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 MIR4259-201ENST00000584466 101 ntBASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 AL591163.1-201ENST00000641757 987 ntBASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.18■□□□□ 0.66
PRPF38BQ5VTL8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms