Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 CBR1-202ENST00000399191 838 ntTSL 3 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 AC092902.6-201ENST00000641783 218 ntBASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CDC42BPAQ5VT25 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDC42BPAQ5VT25 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC26.76■■□□□ 1.88
CDC42BPAQ5VT25 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 AL139400.1-201ENST00000366220 510 ntBASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 FAM58CP-201ENST00000435741 640 ntBASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC26.76■■□□□ 1.87
CDC42BPAQ5VT25 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 AP002472.1-201ENST00000577490 586 ntBASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 AQP6-205ENST00000618286 829 ntTSL 5 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDC42BPAQ5VT25 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 CEND1P1-201ENST00000451006 455 ntBASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 AC002558.1-201ENST00000488906 803 ntBASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 SNHG9-202ENST00000564014 471 ntBASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 GGTLC5P-201ENST00000617623 998 ntBASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 AC097637.2-201ENST00000624096 1997 ntBASIC26.74■■□□□ 1.87
CDC42BPAQ5VT25 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 PTCHD3P3-201ENST00000403073 906 ntBASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 BCAR1-209ENST00000546196 1340 ntBASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CDC42BPAQ5VT25 AL645939.2-201ENST00000427340 991 ntBASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms