Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 AF238378.1-201ENST00000526806 358 ntBASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 REXO1L6P-202ENST00000619970 1078 ntBASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNAP47Q5SQN1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 MRPL3P1-201ENST00000400109 1033 ntBASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 AP000347.1-202ENST00000435868 847 ntBASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 MTCL1P1-201ENST00000446207 792 ntBASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 AC005336.2-201ENST00000593183 939 ntBASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 AC009154.2-201ENST00000621177 724 ntBASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.35■□□□□ 0.37
SNAP47Q5SQN1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 RCN1P2-201ENST00000398357 915 ntBASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 AC132008.2-207ENST00000454517 770 ntBASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.34■□□□□ 0.37
SNAP47Q5SQN1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms