Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 AC091304.2-201ENST00000564639 760 ntBASIC15.66■□□□□ 0.1
FREM1Q5H8C1 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 AL773604.1-201ENST00000617417 272 ntBASIC15.66■□□□□ 0.1
FREM1Q5H8C1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 AL121912.1-201ENST00000603683 238 ntBASIC15.66■□□□□ 0.1
FREM1Q5H8C1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
FREM1Q5H8C1 BX276092.7-203ENST00000637198 1536 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 DUTP2-201ENST00000519164 463 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC134043.2-201ENST00000624206 2238 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC097374.2-201ENST00000618617 1306 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC018712.1-201ENST00000455767 687 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AC011467.2-201ENST00000598425 242 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 AL121772.3-201ENST00000610840 674 ntBASIC15.65■□□□□ 0.1
FREM1Q5H8C1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
FREM1Q5H8C1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
FREM1Q5H8C1 FLJ13224-201ENST00000313737 1514 ntBASIC15.64■□□□□ 0.09
FREM1Q5H8C1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 RCN1P2-201ENST00000398357 915 ntBASIC15.64■□□□□ 0.09
FREM1Q5H8C1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
FREM1Q5H8C1 LINC00304-203ENST00000565008 1864 ntBASIC15.64■□□□□ 0.09
FREM1Q5H8C1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms