Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDH1Q08174 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 AC133963.1-201ENST00000504166 1679 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH1Q08174 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH1Q08174 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 TMPOP1-202ENST00000424642 1267 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDH1Q08174 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PCDH1Q08174 MTCL1P1-201ENST00000446207 792 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 AL671277.2-201ENST00000458060 996 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.23■□□□□ 0.35
PCDH1Q08174 AL136038.3-201ENST00000561909 1096 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 RNF126P1-202ENST00000569893 925 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDH1Q08174 LINC01451-201ENST00000623792 534 ntBASIC17.23■□□□□ 0.35
PCDH1Q08174 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
PCDH1Q08174 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDH1Q08174 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDH1Q08174 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDH1Q08174 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH1Q08174 AC097374.2-201ENST00000618617 1306 ntBASIC17.22■□□□□ 0.35
PCDH1Q08174 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
PCDH1Q08174 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDH1Q08174 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDH1Q08174 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDH1Q08174 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDH1Q08174 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 AC096633.1-201ENST00000422446 749 ntBASIC17.22■□□□□ 0.35
PCDH1Q08174 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 AL353801.3-201ENST00000609898 542 ntBASIC17.22■□□□□ 0.35
PCDH1Q08174 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDH1Q08174 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PCDH1Q08174 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH1Q08174 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDH1Q08174 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDH1Q08174 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDH1Q08174 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDH1Q08174 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 LINC00304-203ENST00000565008 1864 ntBASIC17.21■□□□□ 0.35
PCDH1Q08174 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH1Q08174 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH1Q08174 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDH1Q08174 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH1Q08174 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
PCDH1Q08174 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDH1Q08174 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDH1Q08174 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDH1Q08174 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDH1Q08174 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDH1Q08174 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH1Q08174 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH1Q08174 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDH1Q08174 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.21■□□□□ 0.34
PCDH1Q08174 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms