Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 LINC01126-201ENST00000623515 1646 ntBASIC13.7□□□□□ -0.22
HIST1H1AQ02539 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST1H1AQ02539 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AL096828.2-201ENST00000567259 1965 ntBASIC13.69□□□□□ -0.22
HIST1H1AQ02539 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AL355075.4-201ENST00000554988 638 ntBASIC13.69□□□□□ -0.22
HIST1H1AQ02539 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 KRT8P7-201ENST00000533003 1432 ntBASIC13.69□□□□□ -0.22
HIST1H1AQ02539 HOXB1-202ENST00000577092 1414 ntBASIC13.69□□□□□ -0.22
HIST1H1AQ02539 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.69□□□□□ -0.22
HIST1H1AQ02539 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms