Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD3P84022 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.19■□□□□ 0.66
SMAD3P84022 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD3P84022 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMAD3P84022 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.19■□□□□ 0.66
SMAD3P84022 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMAD3P84022 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
SMAD3P84022 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMAD3P84022 AC006504.4-201ENST00000592118 1568 ntBASIC19.19■□□□□ 0.66
SMAD3P84022 KRT8P47-201ENST00000604727 1398 ntBASIC19.19■□□□□ 0.66
SMAD3P84022 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SMAD3P84022 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD3P84022 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 AC004461.1-201ENST00000412461 403 ntBASIC19.18■□□□□ 0.66
SMAD3P84022 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.18■□□□□ 0.66
SMAD3P84022 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.18■□□□□ 0.66
SMAD3P84022 AD001527.2-201ENST00000622994 785 ntBASIC19.18■□□□□ 0.66
SMAD3P84022 AC004790.2-201ENST00000623588 572 ntBASIC19.18■□□□□ 0.66
SMAD3P84022 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.18■□□□□ 0.66
SMAD3P84022 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD3P84022 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD3P84022 SLC25A24-204ENST00000569674 2357 ntBASIC19.18■□□□□ 0.66
SMAD3P84022 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.17■□□□□ 0.66
SMAD3P84022 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.17■□□□□ 0.66
SMAD3P84022 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMAD3P84022 MRPL20P1-201ENST00000400819 433 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 IGLL3P-201ENST00000412472 434 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 GAPDHP21-201ENST00000450301 1010 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD3P84022 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.17■□□□□ 0.66
SMAD3P84022 AC109322.1-201ENST00000524499 1264 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SMAD3P84022 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.17■□□□□ 0.66
SMAD3P84022 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SMAD3P84022 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.17■□□□□ 0.66
SMAD3P84022 KRT19P2-202ENST00000557173 1012 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 AC096734.2-201ENST00000562054 433 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SMAD3P84022 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 AC105339.1-204ENST00000636249 355 ntBASIC19.17■□□□□ 0.66
SMAD3P84022 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMAD3P84022 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMAD3P84022 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD3P84022 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD3P84022 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD3P84022 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
SMAD3P84022 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD3P84022 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD3P84022 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD3P84022 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD3P84022 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD3P84022 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD3P84022 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD3P84022 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SMAD3P84022 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD3P84022 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD3P84022 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.16■□□□□ 0.66
SMAD3P84022 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.16■□□□□ 0.66
SMAD3P84022 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD3P84022 RPS15P9-201ENST00000494093 319 ntBASIC19.16■□□□□ 0.66
SMAD3P84022 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.16■□□□□ 0.66
SMAD3P84022 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SMAD3P84022 AC015911.4-201ENST00000588022 1070 ntBASIC19.16■□□□□ 0.66
SMAD3P84022 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SMAD3P84022 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms