Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.74■□□□□ 0.11
NKX6-1P78426 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NKX6-1P78426 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NKX6-1P78426 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
NKX6-1P78426 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NKX6-1P78426 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NKX6-1P78426 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX6-1P78426 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NKX6-1P78426 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NKX6-1P78426 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX6-1P78426 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 IGHGP-201ENST00000390555 1178 ntBASIC15.73■□□□□ 0.11
NKX6-1P78426 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.73■□□□□ 0.11
NKX6-1P78426 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.73■□□□□ 0.11
NKX6-1P78426 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NKX6-1P78426 AC005332.3-201ENST00000589904 676 ntBASIC15.73■□□□□ 0.11
NKX6-1P78426 AL390719.2-201ENST00000606993 987 ntBASIC15.73■□□□□ 0.11
NKX6-1P78426 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX6-1P78426 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NKX6-1P78426 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NKX6-1P78426 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.73■□□□□ 0.11
NKX6-1P78426 AL024508.2-201ENST00000607749 1894 ntBASIC15.73■□□□□ 0.11
NKX6-1P78426 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.73■□□□□ 0.11
NKX6-1P78426 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 AC233702.3-201ENST00000578656 1387 ntBASIC15.73■□□□□ 0.11
NKX6-1P78426 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NKX6-1P78426 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 AC018470.1-201ENST00000624790 3129 ntBASIC15.72■□□□□ 0.11
NKX6-1P78426 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.72■□□□□ 0.11
NKX6-1P78426 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 AC008687.5-201ENST00000593746 558 ntBASIC15.72■□□□□ 0.11
NKX6-1P78426 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 AC099343.3-201ENST00000605834 2503 ntBASIC15.72■□□□□ 0.11
NKX6-1P78426 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NKX6-1P78426 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.72■□□□□ 0.11
NKX6-1P78426 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.72■□□□□ 0.11
NKX6-1P78426 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 AC126763.1-201ENST00000552015 2118 ntBASIC15.71■□□□□ 0.11
NKX6-1P78426 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NKX6-1P78426 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms