Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CL1P78423 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.41□□□□□ -0.1
CX3CL1P78423 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.41□□□□□ -0.1
CX3CL1P78423 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 LINC01311-201ENST00000565162 1445 ntBASIC14.41□□□□□ -0.1
CX3CL1P78423 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CL1P78423 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.41□□□□□ -0.1
CX3CL1P78423 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CX3CL1P78423 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CX3CL1P78423 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CX3CL1P78423 CROCCP1-201ENST00000426910 5675 ntBASIC14.4□□□□□ -0.1
CX3CL1P78423 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CX3CL1P78423 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 KRT18P48-201ENST00000434763 852 ntBASIC14.4□□□□□ -0.1
CX3CL1P78423 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.4□□□□□ -0.1
CX3CL1P78423 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.4□□□□□ -0.1
CX3CL1P78423 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.4□□□□□ -0.1
CX3CL1P78423 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.4□□□□□ -0.1
CX3CL1P78423 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CL1P78423 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.4□□□□□ -0.1
CX3CL1P78423 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.4□□□□□ -0.1
CX3CL1P78423 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CX3CL1P78423 HYMAI.1-201ENST00000620949 238 ntBASIC14.4□□□□□ -0.1
CX3CL1P78423 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.4□□□□□ -0.1
CX3CL1P78423 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.4□□□□□ -0.1
CX3CL1P78423 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 AC093010.1-201ENST00000473625 1624 ntBASIC14.4□□□□□ -0.1
CX3CL1P78423 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CX3CL1P78423 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.11
CX3CL1P78423 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.39□□□□□ -0.11
CX3CL1P78423 KRT89P-201ENST00000620027 1478 ntBASIC14.39□□□□□ -0.11
CX3CL1P78423 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CX3CL1P78423 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CX3CL1P78423 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.39□□□□□ -0.11
CX3CL1P78423 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CX3CL1P78423 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.39□□□□□ -0.11
CX3CL1P78423 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.39□□□□□ -0.11
CX3CL1P78423 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 AL671277.2-201ENST00000458060 996 ntBASIC14.39□□□□□ -0.11
CX3CL1P78423 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.39□□□□□ -0.11
CX3CL1P78423 ZNF444P1-201ENST00000559497 298 ntBASIC14.39□□□□□ -0.11
CX3CL1P78423 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.39□□□□□ -0.11
CX3CL1P78423 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CX3CL1P78423 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 AC138028.4-201ENST00000564984 1845 ntBASIC14.38□□□□□ -0.11
CX3CL1P78423 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CX3CL1P78423 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms