Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
TPM4P67936 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.02■□□□□ 0.8
TPM4P67936 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TPM4P67936 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TPM4P67936 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM4P67936 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TPM4P67936 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TPM4P67936 RPPH1-201ENST00000516869 333 ntBASIC20.02■□□□□ 0.8
TPM4P67936 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TPM4P67936 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 CD177P1-201ENST00000606252 935 ntBASIC20.02■□□□□ 0.8
TPM4P67936 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.02■□□□□ 0.8
TPM4P67936 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TPM4P67936 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TPM4P67936 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
TPM4P67936 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.02■□□□□ 0.8
TPM4P67936 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TPM4P67936 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM4P67936 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TPM4P67936 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM4P67936 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM4P67936 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.02■□□□□ 0.79
TPM4P67936 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM4P67936 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM4P67936 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TPM4P67936 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TPM4P67936 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TPM4P67936 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TPM4P67936 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.01■□□□□ 0.79
TPM4P67936 AC128676.1-201ENST00000454392 318 ntBASIC20.01■□□□□ 0.79
TPM4P67936 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TPM4P67936 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.01■□□□□ 0.79
TPM4P67936 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.01■□□□□ 0.79
TPM4P67936 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.01■□□□□ 0.79
TPM4P67936 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM4P67936 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.01■□□□□ 0.79
TPM4P67936 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TPM4P67936 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TPM4P67936 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.01■□□□□ 0.79
TPM4P67936 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TPM4P67936 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TPM4P67936 CROCCP2-202ENST00000412962 2773 ntBASIC20■□□□□ 0.79
TPM4P67936 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20■□□□□ 0.79
TPM4P67936 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TPM4P67936 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20■□□□□ 0.79
TPM4P67936 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20■□□□□ 0.79
TPM4P67936 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20■□□□□ 0.79
TPM4P67936 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20■□□□□ 0.79
TPM4P67936 GRAMD4P8-201ENST00000605465 1115 ntBASIC20■□□□□ 0.79
TPM4P67936 FAM197Y4-202ENST00000622692 608 ntBASIC20■□□□□ 0.79
TPM4P67936 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20■□□□□ 0.79
TPM4P67936 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20■□□□□ 0.79
TPM4P67936 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TPM4P67936 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 AC022211.2-201ENST00000585075 2527 ntBASIC20■□□□□ 0.79
TPM4P67936 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TPM4P67936 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TPM4P67936 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TPM4P67936 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TPM4P67936 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 NKILA-202ENST00000614771 2598 ntBASIC19.99■□□□□ 0.79
TPM4P67936 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.99■□□□□ 0.79
TPM4P67936 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TPM4P67936 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TPM4P67936 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms