Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 IGLL3P-201ENST00000412472 434 ntBASIC18.69■□□□□ 0.58
ERVFC1P60507 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.69■□□□□ 0.58
ERVFC1P60507 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.69■□□□□ 0.58
ERVFC1P60507 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.69■□□□□ 0.58
ERVFC1P60507 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.69■□□□□ 0.58
ERVFC1P60507 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERVFC1P60507 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ERVFC1P60507 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERVFC1P60507 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERVFC1P60507 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERVFC1P60507 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERVFC1P60507 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERVFC1P60507 ELL2P1-201ENST00000413990 1906 ntBASIC18.68■□□□□ 0.58
ERVFC1P60507 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.68■□□□□ 0.58
ERVFC1P60507 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.68■□□□□ 0.58
ERVFC1P60507 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.68■□□□□ 0.58
ERVFC1P60507 KLF4P1-201ENST00000412782 1185 ntBASIC18.68■□□□□ 0.58
ERVFC1P60507 MKNK2P1-201ENST00000437526 628 ntBASIC18.68■□□□□ 0.58
ERVFC1P60507 CEND1P1-201ENST00000451006 455 ntBASIC18.68■□□□□ 0.58
ERVFC1P60507 SIGLEC30P-201ENST00000455569 941 ntBASIC18.68■□□□□ 0.58
ERVFC1P60507 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.68■□□□□ 0.58
ERVFC1P60507 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.68■□□□□ 0.58
ERVFC1P60507 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.68■□□□□ 0.58
ERVFC1P60507 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.68■□□□□ 0.58
ERVFC1P60507 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.68■□□□□ 0.58
ERVFC1P60507 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
ERVFC1P60507 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.68■□□□□ 0.58
ERVFC1P60507 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ERVFC1P60507 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.68■□□□□ 0.58
ERVFC1P60507 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.68■□□□□ 0.58
ERVFC1P60507 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
ERVFC1P60507 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERVFC1P60507 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.67■□□□□ 0.58
ERVFC1P60507 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.67■□□□□ 0.58
ERVFC1P60507 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ERVFC1P60507 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.67■□□□□ 0.58
ERVFC1P60507 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERVFC1P60507 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.67■□□□□ 0.58
ERVFC1P60507 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.67■□□□□ 0.58
ERVFC1P60507 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.67■□□□□ 0.58
ERVFC1P60507 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.67■□□□□ 0.58
ERVFC1P60507 AC019129.2-201ENST00000609837 1235 ntBASIC18.67■□□□□ 0.58
ERVFC1P60507 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.67■□□□□ 0.58
ERVFC1P60507 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.67■□□□□ 0.58
ERVFC1P60507 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.67■□□□□ 0.58
ERVFC1P60507 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.67■□□□□ 0.58
ERVFC1P60507 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.66■□□□□ 0.58
ERVFC1P60507 AL645939.2-201ENST00000427340 991 ntBASIC18.66■□□□□ 0.58
ERVFC1P60507 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.66■□□□□ 0.58
ERVFC1P60507 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.66■□□□□ 0.58
ERVFC1P60507 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.66■□□□□ 0.58
ERVFC1P60507 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.66■□□□□ 0.58
ERVFC1P60507 AL031432.2-201ENST00000566714 459 ntBASIC18.66■□□□□ 0.58
ERVFC1P60507 AL928711.1-201ENST00000570165 459 ntBASIC18.66■□□□□ 0.58
ERVFC1P60507 AP002472.1-201ENST00000577490 586 ntBASIC18.66■□□□□ 0.58
ERVFC1P60507 MIR3197-201ENST00000582241 73 ntBASIC18.66■□□□□ 0.58
ERVFC1P60507 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.66■□□□□ 0.58
ERVFC1P60507 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ERVFC1P60507 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
ERVFC1P60507 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERVFC1P60507 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
ERVFC1P60507 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ERVFC1P60507 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.65■□□□□ 0.58
ERVFC1P60507 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERVFC1P60507 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms