Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 AL138781.2-201ENST00000617896 1843 ntBASIC13.07□□□□□ -0.32
APOC4P55056 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC4P55056 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC4P55056 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC4P55056 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.07□□□□□ -0.32
APOC4P55056 AC008608.2-201ENST00000606089 416 ntBASIC13.07□□□□□ -0.32
APOC4P55056 AL031008.1-201ENST00000619963 541 ntBASIC13.07□□□□□ -0.32
APOC4P55056 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.07□□□□□ -0.32
APOC4P55056 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC4P55056 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOC4P55056 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.07□□□□□ -0.32
APOC4P55056 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APOC4P55056 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APOC4P55056 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.06□□□□□ -0.32
APOC4P55056 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 AC132008.2-207ENST00000454517 770 ntBASIC13.06□□□□□ -0.32
APOC4P55056 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.06□□□□□ -0.32
APOC4P55056 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.06□□□□□ -0.32
APOC4P55056 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.06□□□□□ -0.32
APOC4P55056 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 AL096828.2-201ENST00000567259 1965 ntBASIC13.06□□□□□ -0.32
APOC4P55056 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
APOC4P55056 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC4P55056 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC4P55056 INTS4P1-201ENST00000438455 1935 ntBASIC13.05□□□□□ -0.32
APOC4P55056 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
APOC4P55056 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC4P55056 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC4P55056 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms