Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 AC027369.6-201ENST00000525520 931 ntBASIC19.98■□□□□ 0.79
LBX1P52954 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 MIR4538-201ENST00000581377 78 ntBASIC19.98■□□□□ 0.79
LBX1P52954 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.98■□□□□ 0.79
LBX1P52954 GNAS-203ENST00000306120 1878 ntBASIC19.98■□□□□ 0.79
LBX1P52954 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.98■□□□□ 0.79
LBX1P52954 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.98■□□□□ 0.79
LBX1P52954 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LBX1P52954 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.98■□□□□ 0.79
LBX1P52954 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LBX1P52954 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LBX1P52954 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LBX1P52954 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LBX1P52954 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LBX1P52954 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LBX1P52954 AC092506.1-202ENST00000401022 528 ntBASIC19.97■□□□□ 0.79
LBX1P52954 AL512384.1-201ENST00000406683 331 ntBASIC19.97■□□□□ 0.79
LBX1P52954 TSSK5P-201ENST00000423978 907 ntBASIC19.97■□□□□ 0.79
LBX1P52954 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.97■□□□□ 0.79
LBX1P52954 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
LBX1P52954 MIR6787-201ENST00000616675 61 ntBASIC19.97■□□□□ 0.79
LBX1P52954 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LBX1P52954 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.97■□□□□ 0.79
LBX1P52954 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.97■□□□□ 0.79
LBX1P52954 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LBX1P52954 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.97■□□□□ 0.79
LBX1P52954 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LBX1P52954 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 AL049757.1-201ENST00000616842 1596 ntBASIC19.96■□□□□ 0.79
LBX1P52954 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.96■□□□□ 0.79
LBX1P52954 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 COX5BP2-201ENST00000392354 334 ntBASIC19.96■□□□□ 0.79
LBX1P52954 ELK2AP-201ENST00000392510 1007 ntBASIC19.96■□□□□ 0.79
LBX1P52954 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
LBX1P52954 AC140658.5-201ENST00000438532 169 ntBASIC19.96■□□□□ 0.79
LBX1P52954 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.96■□□□□ 0.79
LBX1P52954 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 MIR4259-201ENST00000584466 101 ntBASIC19.96■□□□□ 0.79
LBX1P52954 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LBX1P52954 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.96■□□□□ 0.79
LBX1P52954 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LBX1P52954 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
LBX1P52954 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.95■□□□□ 0.78
LBX1P52954 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 AC007541.1-201ENST00000570282 1469 ntBASIC19.95■□□□□ 0.78
LBX1P52954 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 RARRES2P8-201ENST00000566335 367 ntBASIC19.95■□□□□ 0.78
LBX1P52954 AC106886.1-201ENST00000568660 600 ntBASIC19.95■□□□□ 0.78
LBX1P52954 AC140912.1-201ENST00000577171 1054 ntBASIC19.95■□□□□ 0.78
LBX1P52954 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LBX1P52954 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LBX1P52954 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.95■□□□□ 0.78
LBX1P52954 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.95■□□□□ 0.78
LBX1P52954 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.95■□□□□ 0.78
LBX1P52954 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 AKAP8P1-201ENST00000434743 1349 ntBASIC19.95■□□□□ 0.78
LBX1P52954 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.95■□□□□ 0.78
LBX1P52954 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LBX1P52954 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LBX1P52954 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms