Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CPT1AP50416 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPT1AP50416 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPT1AP50416 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPT1AP50416 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CPT1AP50416 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPT1AP50416 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.69■□□□□ 0.74
CPT1AP50416 AC006504.4-201ENST00000592118 1568 ntBASIC19.69■□□□□ 0.74
CPT1AP50416 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPT1AP50416 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
CPT1AP50416 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.69■□□□□ 0.74
CPT1AP50416 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.69■□□□□ 0.74
CPT1AP50416 AC148477.5-201ENST00000625164 1645 ntBASIC19.69■□□□□ 0.74
CPT1AP50416 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CPT1AP50416 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
CPT1AP50416 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CPT1AP50416 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CPT1AP50416 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.68■□□□□ 0.74
CPT1AP50416 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.68■□□□□ 0.74
CPT1AP50416 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.68■□□□□ 0.74
CPT1AP50416 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.68■□□□□ 0.74
CPT1AP50416 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.68■□□□□ 0.74
CPT1AP50416 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.68■□□□□ 0.74
CPT1AP50416 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CPT1AP50416 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPT1AP50416 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CPT1AP50416 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CPT1AP50416 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 AC018445.3-201ENST00000624177 1945 ntBASIC19.67■□□□□ 0.74
CPT1AP50416 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 MCCD1P2-201ENST00000423228 335 ntBASIC19.67■□□□□ 0.74
CPT1AP50416 PMS2P2-201ENST00000425039 1128 ntBASIC19.67■□□□□ 0.74
CPT1AP50416 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.67■□□□□ 0.74
CPT1AP50416 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.67■□□□□ 0.74
CPT1AP50416 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.67■□□□□ 0.74
CPT1AP50416 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.67■□□□□ 0.74
CPT1AP50416 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.67■□□□□ 0.74
CPT1AP50416 AC002310.6-201ENST00000624451 1377 ntBASIC19.67■□□□□ 0.74
CPT1AP50416 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CPT1AP50416 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CPT1AP50416 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.66■□□□□ 0.74
CPT1AP50416 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.66■□□□□ 0.74
CPT1AP50416 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CPT1AP50416 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 AC211486.1-202ENST00000416371 468 ntBASIC19.66■□□□□ 0.74
CPT1AP50416 KRT18P2-201ENST00000447938 1258 ntBASIC19.66■□□□□ 0.74
CPT1AP50416 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 AC211476.1-201ENST00000503899 468 ntBASIC19.66■□□□□ 0.74
CPT1AP50416 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.66■□□□□ 0.74
CPT1AP50416 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.66■□□□□ 0.74
CPT1AP50416 MIR4751-201ENST00000578027 74 ntBASIC19.66■□□□□ 0.74
CPT1AP50416 AC019129.2-201ENST00000609837 1235 ntBASIC19.66■□□□□ 0.74
CPT1AP50416 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.66■□□□□ 0.74
CPT1AP50416 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CPT1AP50416 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms