Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.46■□□□□ 0.71
CASP4P49662 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
CASP4P49662 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CASP4P49662 AC124864.1-201ENST00000623408 392 ntBASIC19.46■□□□□ 0.71
CASP4P49662 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CASP4P49662 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.46■□□□□ 0.71
CASP4P49662 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASP4P49662 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.45■□□□□ 0.7
CASP4P49662 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
CASP4P49662 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CASP4P49662 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.45■□□□□ 0.7
CASP4P49662 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CASP4P49662 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CASP4P49662 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CASP4P49662 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 BX276092.5-203ENST00000456199 560 ntBASIC19.45■□□□□ 0.7
CASP4P49662 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.45■□□□□ 0.7
CASP4P49662 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.45■□□□□ 0.7
CASP4P49662 GUSBP12-201ENST00000513727 720 ntBASIC19.45■□□□□ 0.7
CASP4P49662 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.45■□□□□ 0.7
CASP4P49662 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CASP4P49662 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.45■□□□□ 0.7
CASP4P49662 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASP4P49662 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.45■□□□□ 0.7
CASP4P49662 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CASP4P49662 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASP4P49662 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASP4P49662 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CASP4P49662 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CASP4P49662 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CASP4P49662 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP4P49662 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.44■□□□□ 0.7
CASP4P49662 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 AC091607.1-201ENST00000490318 1060 ntBASIC19.44■□□□□ 0.7
CASP4P49662 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.44■□□□□ 0.7
CASP4P49662 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP4P49662 AL121672.3-201ENST00000608644 468 ntBASIC19.44■□□□□ 0.7
CASP4P49662 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP4P49662 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.44■□□□□ 0.7
CASP4P49662 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CASP4P49662 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASP4P49662 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CASP4P49662 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CASP4P49662 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 AP002383.4-201ENST00000442518 975 ntBASIC19.43■□□□□ 0.7
CASP4P49662 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.43■□□□□ 0.7
CASP4P49662 AL353801.3-201ENST00000609898 542 ntBASIC19.43■□□□□ 0.7
CASP4P49662 IGHV3-41-201ENST00000613121 348 ntBASIC19.43■□□□□ 0.7
CASP4P49662 AC116407.2-201ENST00000613639 860 ntBASIC19.43■□□□□ 0.7
CASP4P49662 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.43■□□□□ 0.7
CASP4P49662 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASP4P49662 LINC00304-203ENST00000565008 1864 ntBASIC19.43■□□□□ 0.7
CASP4P49662 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms