Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.21■□□□□ 0.83
TM4SF4P48230 KRT8P48-201ENST00000515599 1220 ntBASIC20.21■□□□□ 0.83
TM4SF4P48230 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.21■□□□□ 0.83
TM4SF4P48230 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.21■□□□□ 0.83
TM4SF4P48230 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.21■□□□□ 0.83
TM4SF4P48230 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 AP001059.3-201ENST00000619053 235 ntBASIC20.21■□□□□ 0.83
TM4SF4P48230 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF4P48230 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.21■□□□□ 0.83
TM4SF4P48230 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TM4SF4P48230 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
TM4SF4P48230 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.21■□□□□ 0.83
TM4SF4P48230 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TM4SF4P48230 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM4SF4P48230 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.2■□□□□ 0.83
TM4SF4P48230 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TM4SF4P48230 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.2■□□□□ 0.82
TM4SF4P48230 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TM4SF4P48230 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.2■□□□□ 0.82
TM4SF4P48230 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.2■□□□□ 0.82
TM4SF4P48230 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.2■□□□□ 0.82
TM4SF4P48230 MEIS3P1-201ENST00000495167 958 ntBASIC20.2■□□□□ 0.82
TM4SF4P48230 CR383656.12-201ENST00000549567 513 ntBASIC20.2■□□□□ 0.82
TM4SF4P48230 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.2■□□□□ 0.82
TM4SF4P48230 AC109462.3-201ENST00000573934 613 ntBASIC20.2■□□□□ 0.82
TM4SF4P48230 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.2■□□□□ 0.82
TM4SF4P48230 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.2■□□□□ 0.82
TM4SF4P48230 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TM4SF4P48230 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM4SF4P48230 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.19■□□□□ 0.82
TM4SF4P48230 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
TM4SF4P48230 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TM4SF4P48230 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
TM4SF4P48230 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 AL355306.1-201ENST00000415580 579 ntBASIC20.19■□□□□ 0.82
TM4SF4P48230 AL513480.1-201ENST00000451731 511 ntBASIC20.19■□□□□ 0.82
TM4SF4P48230 KLF2P3-201ENST00000451977 1087 ntBASIC20.19■□□□□ 0.82
TM4SF4P48230 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.19■□□□□ 0.82
TM4SF4P48230 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 AP005018.1-201ENST00000525475 301 ntBASIC20.19■□□□□ 0.82
TM4SF4P48230 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.19■□□□□ 0.82
TM4SF4P48230 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TM4SF4P48230 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM4SF4P48230 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF4P48230 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TM4SF4P48230 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.18■□□□□ 0.82
TM4SF4P48230 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.18■□□□□ 0.82
TM4SF4P48230 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.18■□□□□ 0.82
TM4SF4P48230 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.18■□□□□ 0.82
TM4SF4P48230 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TM4SF4P48230 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TM4SF4P48230 ESPNP-201ENST00000270691 2015 ntBASIC20.18■□□□□ 0.82
TM4SF4P48230 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM4SF4P48230 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF4P48230 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TM4SF4P48230 AC093010.1-201ENST00000473625 1624 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms