Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.47■□□□□ 0.71
USP8P40818 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USP8P40818 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
USP8P40818 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.47■□□□□ 0.71
USP8P40818 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.47■□□□□ 0.71
USP8P40818 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP8P40818 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
USP8P40818 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.46■□□□□ 0.71
USP8P40818 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.46■□□□□ 0.71
USP8P40818 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.46■□□□□ 0.71
USP8P40818 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.46■□□□□ 0.71
USP8P40818 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.46■□□□□ 0.71
USP8P40818 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 AC073508.3-201ENST00000619697 1419 ntBASIC19.46■□□□□ 0.71
USP8P40818 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
USP8P40818 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.46■□□□□ 0.71
USP8P40818 AC117947.1-201ENST00000427448 529 ntBASIC19.46■□□□□ 0.71
USP8P40818 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.46■□□□□ 0.71
USP8P40818 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.46■□□□□ 0.71
USP8P40818 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.46■□□□□ 0.71
USP8P40818 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.46■□□□□ 0.71
USP8P40818 OR6D1P-203ENST00000641209 4860 ntBASIC19.46■□□□□ 0.71
USP8P40818 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.46■□□□□ 0.71
USP8P40818 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
USP8P40818 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP8P40818 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.46■□□□□ 0.7
USP8P40818 AC134043.2-201ENST00000624206 2238 ntBASIC19.45■□□□□ 0.7
USP8P40818 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
USP8P40818 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.45■□□□□ 0.7
USP8P40818 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.45■□□□□ 0.7
USP8P40818 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP8P40818 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP8P40818 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP8P40818 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
USP8P40818 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP8P40818 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.45■□□□□ 0.7
USP8P40818 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.45■□□□□ 0.7
USP8P40818 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP8P40818 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.45■□□□□ 0.7
USP8P40818 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP8P40818 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.44■□□□□ 0.7
USP8P40818 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.44■□□□□ 0.7
USP8P40818 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP8P40818 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms