Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ERCC3P19447 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.64■□□□□ 0.89
ERCC3P19447 TERC-201ENST00000602385 541 ntBASIC20.64■□□□□ 0.89
ERCC3P19447 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.64■□□□□ 0.89
ERCC3P19447 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ERCC3P19447 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.64■□□□□ 0.89
ERCC3P19447 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.63■□□□□ 0.89
ERCC3P19447 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC3P19447 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
ERCC3P19447 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
ERCC3P19447 ZNF259P1-201ENST00000407656 1365 ntBASIC20.63■□□□□ 0.89
ERCC3P19447 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 PMS2P7-201ENST00000506558 1336 ntBASIC20.63■□□□□ 0.89
ERCC3P19447 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC3P19447 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 RPS2P1-201ENST00000434010 821 ntBASIC20.63■□□□□ 0.89
ERCC3P19447 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 AC112698.1-201ENST00000510299 916 ntBASIC20.63■□□□□ 0.89
ERCC3P19447 AC092865.5-201ENST00000545435 363 ntBASIC20.63■□□□□ 0.89
ERCC3P19447 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC3P19447 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC3P19447 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ERCC3P19447 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC3P19447 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
ERCC3P19447 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ERCC3P19447 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ERCC3P19447 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ERCC3P19447 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC3P19447 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC3P19447 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC3P19447 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC3P19447 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC3P19447 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC3P19447 AC126763.1-201ENST00000552015 2118 ntBASIC20.62■□□□□ 0.89
ERCC3P19447 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.62■□□□□ 0.89
ERCC3P19447 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC3P19447 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC3P19447 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC3P19447 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC3P19447 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ERCC3P19447 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.61■□□□□ 0.89
ERCC3P19447 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.61■□□□□ 0.89
ERCC3P19447 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC3P19447 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC3P19447 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ERCC3P19447 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC3P19447 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.61■□□□□ 0.89
ERCC3P19447 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC3P19447 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ERCC3P19447 AL356309.3-201ENST00000624132 1934 ntBASIC20.61■□□□□ 0.89
ERCC3P19447 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC3P19447 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ERCC3P19447 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms