Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.28■■□□□ 1
NCLP19338 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NCLP19338 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NCLP19338 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.27■■□□□ 1
NCLP19338 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC21.27■■□□□ 1
NCLP19338 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.27■■□□□ 1
NCLP19338 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NCLP19338 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.27■■□□□ 1
NCLP19338 MESTP1-201ENST00000404287 994 ntBASIC21.27■■□□□ 1
NCLP19338 B3GAT3P1-201ENST00000471720 806 ntBASIC21.27■■□□□ 1
NCLP19338 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.27■■□□□ 1
NCLP19338 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.27■■□□□ 1
NCLP19338 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.27■■□□□ 1
NCLP19338 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NCLP19338 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC21.27■■□□□ 1
NCLP19338 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.27■■□□□ 1
NCLP19338 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.27■■□□□ 1
NCLP19338 KRT8P9-201ENST00000558927 1449 ntBASIC21.27■■□□□ 1
NCLP19338 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.27■■□□□ 1
NCLP19338 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCLP19338 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCLP19338 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCLP19338 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.27■□□□□ 0.99
NCLP19338 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCLP19338 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NCLP19338 OVCH1-AS1-204ENST00000641955 5529 ntBASIC21.27■□□□□ 0.99
NCLP19338 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NCLP19338 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.26■□□□□ 0.99
NCLP19338 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.26■□□□□ 0.99
NCLP19338 MIR1238-201ENST00000408483 83 ntBASIC21.26■□□□□ 0.99
NCLP19338 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.26■□□□□ 0.99
NCLP19338 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 FITM1-202ENST00000559294 800 ntBASIC21.26■□□□□ 0.99
NCLP19338 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.26■□□□□ 0.99
NCLP19338 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.26■□□□□ 0.99
NCLP19338 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.26■□□□□ 0.99
NCLP19338 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.26■□□□□ 0.99
NCLP19338 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
NCLP19338 GMCL1P1-201ENST00000463439 1581 ntBASIC21.26■□□□□ 0.99
NCLP19338 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NCLP19338 FSCN1P1-201ENST00000568912 1481 ntBASIC21.26■□□□□ 0.99
NCLP19338 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.25■□□□□ 0.99
NCLP19338 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.25■□□□□ 0.99
NCLP19338 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.25■□□□□ 0.99
NCLP19338 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.25■□□□□ 0.99
NCLP19338 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.25■□□□□ 0.99
NCLP19338 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.25■□□□□ 0.99
NCLP19338 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NCLP19338 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.24■□□□□ 0.99
NCLP19338 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.24■□□□□ 0.99
NCLP19338 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.24■□□□□ 0.99
NCLP19338 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
NCLP19338 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NCLP19338 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.24■□□□□ 0.99
NCLP19338 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.24■□□□□ 0.99
NCLP19338 MCCD1P1-208ENST00000445732 328 ntBASIC21.24■□□□□ 0.99
NCLP19338 KRT18P41-201ENST00000518924 1277 ntBASIC21.24■□□□□ 0.99
NCLP19338 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NCLP19338 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.24■□□□□ 0.99
NCLP19338 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.24■□□□□ 0.99
NCLP19338 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.24■□□□□ 0.99
NCLP19338 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms