Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.18■□□□□ 0.66
CD58P19256 AP002414.4-201ENST00000589764 1148 ntBASIC19.18■□□□□ 0.66
CD58P19256 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD58P19256 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD58P19256 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD58P19256 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.18■□□□□ 0.66
CD58P19256 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
CD58P19256 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD58P19256 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD58P19256 KRT8P47-201ENST00000604727 1398 ntBASIC19.18■□□□□ 0.66
CD58P19256 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.17■□□□□ 0.66
CD58P19256 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.17■□□□□ 0.66
CD58P19256 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.17■□□□□ 0.66
CD58P19256 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
CD58P19256 AC012317.2-201ENST00000623305 2251 ntBASIC19.17■□□□□ 0.66
CD58P19256 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CD58P19256 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.17■□□□□ 0.66
CD58P19256 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD58P19256 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.17■□□□□ 0.66
CD58P19256 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 AC092119.3-201ENST00000612618 583 ntBASIC19.17■□□□□ 0.66
CD58P19256 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.17■□□□□ 0.66
CD58P19256 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
CD58P19256 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD58P19256 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.17■□□□□ 0.66
CD58P19256 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.17■□□□□ 0.66
CD58P19256 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
CD58P19256 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CD58P19256 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.16■□□□□ 0.66
CD58P19256 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.16■□□□□ 0.66
CD58P19256 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.16■□□□□ 0.66
CD58P19256 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.16■□□□□ 0.66
CD58P19256 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CD58P19256 FZD10-202ENST00000539839 3282 ntBASIC19.16■□□□□ 0.66
CD58P19256 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CD58P19256 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD58P19256 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
CD58P19256 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.15■□□□□ 0.66
CD58P19256 KRT18P55-202ENST00000578578 1546 ntBASIC19.15■□□□□ 0.66
CD58P19256 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CD58P19256 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CD58P19256 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.15■□□□□ 0.66
CD58P19256 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.15■□□□□ 0.66
CD58P19256 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.15■□□□□ 0.66
CD58P19256 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.15■□□□□ 0.66
CD58P19256 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 AL845331.1-201ENST00000424978 1190 ntBASIC19.15■□□□□ 0.66
CD58P19256 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.15■□□□□ 0.66
CD58P19256 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.15■□□□□ 0.66
CD58P19256 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.15■□□□□ 0.66
CD58P19256 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CD58P19256 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.15■□□□□ 0.66
CD58P19256 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD58P19256 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD58P19256 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CD58P19256 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.14■□□□□ 0.65
CD58P19256 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CD58P19256 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms