Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
KRT4P19013 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT4P19013 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT4P19013 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.93■□□□□ 0.46
KRT4P19013 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT4P19013 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT4P19013 FAM197Y4-202ENST00000622692 608 ntBASIC17.93■□□□□ 0.46
KRT4P19013 AC112497.1-201ENST00000624824 639 ntBASIC17.93■□□□□ 0.46
KRT4P19013 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
KRT4P19013 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
KRT4P19013 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT4P19013 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
KRT4P19013 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 AC022898.2-201ENST00000616822 1312 ntBASIC17.93■□□□□ 0.46
KRT4P19013 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT4P19013 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
KRT4P19013 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT4P19013 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT4P19013 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT4P19013 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT4P19013 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
KRT4P19013 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRT4P19013 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.92■□□□□ 0.46
KRT4P19013 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT4P19013 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.92■□□□□ 0.46
KRT4P19013 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.92■□□□□ 0.46
KRT4P19013 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.92■□□□□ 0.46
KRT4P19013 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT4P19013 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
KRT4P19013 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT4P19013 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KRT4P19013 UBALD1-205ENST00000590891 2641 ntBASIC17.91■□□□□ 0.46
KRT4P19013 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT4P19013 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT4P19013 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT4P19013 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT4P19013 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT4P19013 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT4P19013 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.91■□□□□ 0.46
KRT4P19013 AL023803.3-201ENST00000615559 522 ntBASIC17.91■□□□□ 0.46
KRT4P19013 AL359736.2-201ENST00000621992 437 ntBASIC17.91■□□□□ 0.46
KRT4P19013 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT4P19013 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT4P19013 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT4P19013 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KRT4P19013 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
KRT4P19013 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT4P19013 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT4P19013 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT4P19013 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KRT4P19013 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT4P19013 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT4P19013 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT4P19013 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
KRT4P19013 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KRT4P19013 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT4P19013 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms