Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.38■□□□□ 0.53
ERCC2P18074 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.37■□□□□ 0.53
ERCC2P18074 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.37■□□□□ 0.53
ERCC2P18074 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
ERCC2P18074 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC2P18074 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC2P18074 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 AP002383.4-201ENST00000442518 975 ntBASIC18.37■□□□□ 0.53
ERCC2P18074 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.37■□□□□ 0.53
ERCC2P18074 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.37■□□□□ 0.53
ERCC2P18074 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.37■□□□□ 0.53
ERCC2P18074 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC2P18074 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
ERCC2P18074 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ERCC2P18074 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ERCC2P18074 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
ERCC2P18074 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.36■□□□□ 0.53
ERCC2P18074 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ERCC2P18074 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ERCC2P18074 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ERCC2P18074 DDX43P3-201ENST00000441064 443 ntBASIC18.36■□□□□ 0.53
ERCC2P18074 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.36■□□□□ 0.53
ERCC2P18074 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ERCC2P18074 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
ERCC2P18074 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ERCC2P18074 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
ERCC2P18074 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC2P18074 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
ERCC2P18074 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 KRT18P1-202ENST00000452408 1331 ntBASIC18.35■□□□□ 0.53
ERCC2P18074 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.35■□□□□ 0.53
ERCC2P18074 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 AC011840.4-201ENST00000578471 627 ntBASIC18.35■□□□□ 0.53
ERCC2P18074 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.35■□□□□ 0.53
ERCC2P18074 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ERCC2P18074 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
ERCC2P18074 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
ERCC2P18074 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ERCC2P18074 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.34■□□□□ 0.53
ERCC2P18074 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.34■□□□□ 0.53
ERCC2P18074 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ERCC2P18074 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.34■□□□□ 0.53
ERCC2P18074 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ERCC2P18074 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms