Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
BCKDHAP12694 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BCKDHAP12694 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHAP12694 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHAP12694 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHAP12694 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
BCKDHAP12694 REXO1L11P-201ENST00000620964 1927 ntBASIC17.07■□□□□ 0.32
BCKDHAP12694 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.07■□□□□ 0.32
BCKDHAP12694 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.07■□□□□ 0.32
BCKDHAP12694 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
BCKDHAP12694 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.07■□□□□ 0.32
BCKDHAP12694 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BCKDHAP12694 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHAP12694 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHAP12694 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 KRT8P47-201ENST00000604727 1398 ntBASIC17.06■□□□□ 0.32
BCKDHAP12694 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHAP12694 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.06■□□□□ 0.32
BCKDHAP12694 AC010203.1-204ENST00000548782 407 ntBASIC17.06■□□□□ 0.32
BCKDHAP12694 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.06■□□□□ 0.32
BCKDHAP12694 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 AL136038.4-201ENST00000603606 1261 ntBASIC17.06■□□□□ 0.32
BCKDHAP12694 CROCCP2-202ENST00000412962 2773 ntBASIC17.06■□□□□ 0.32
BCKDHAP12694 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHAP12694 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.06■□□□□ 0.32
BCKDHAP12694 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BCKDHAP12694 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
BCKDHAP12694 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BCKDHAP12694 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHAP12694 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHAP12694 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHAP12694 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHAP12694 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
BCKDHAP12694 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.05■□□□□ 0.32
BCKDHAP12694 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHAP12694 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.05■□□□□ 0.32
BCKDHAP12694 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BCKDHAP12694 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 AL441883.1-201ENST00000566170 1045 ntBASIC17.05■□□□□ 0.32
BCKDHAP12694 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.05■□□□□ 0.32
BCKDHAP12694 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
BCKDHAP12694 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BCKDHAP12694 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
BCKDHAP12694 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.05■□□□□ 0.32
BCKDHAP12694 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
BCKDHAP12694 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
BCKDHAP12694 PCDHA12-202ENST00000613593 2588 ntBASIC17.04■□□□□ 0.32
BCKDHAP12694 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BCKDHAP12694 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms